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Manual of molecular and clinical laboratory immunology / edited by Barbara Detrick, John L. Schmitz, Robert G. Hamilton. -- 8th ed. -- Washington, DC : ASM Press, c2016. – (63.17073/M294m/8th ed.)

Contents

Editorial Board / xi

Contributors / xiii

Foreword: How It Began / xxiii

Preface / xxv

Author and Editor Conflicts of Interest / xxvii

Section A

GENERAL METHODS /  1

1  Introduction / 3

2  Molecular Methods for Diagnosis of Genetic Diseases Involving the Immune System / 5

3  The Human Microbiome and Clinical Immunology / 19

4  Protein Analysis in the Clinical Immunology Laboratory / 26

section B

IMMUNOGLOBULIN METHODS / 47

5  Introduction / 49

6  Immunoglobulin Genes / 51

7  Immunoglobulin Quantification and Viscosity Measurement / 65

8  Clinical Indications and Applications of Serum and Urine Protein Electrophoresis / 74

9  Immunochemical Characterization of Immunoglobulins in Serum, Urine, and Cerebrospinal Fluid / 89

10 Cryoglobulins, Cryofibrinogenemia, and Pyroglobulins / 101

11 Strategy for Detecting and Following Monoclonal Gammopathies / 112

Section C

COMPLEMENT /  125

12 Introduction / 127

13 The Classical Pathway of Complement / 129

14 Analysis of Activity of Mannan-Binding Lectin, an Initiator of the Lectin Pathway of the Complement System / 133

15 The Nature of the Diseases That Arise from Improper Regulation of the Alternative Pathway of Complement / 138

Section D

FLOW CYTOMETRY /  145

16 Introduction / 147

17 Polychromatic Flow Cytometry / 149

18 High-Sensitivity Detection of Red and White Blood Cells in Paroxysmal Nocturnal Hemoglobinuria by Multiparameter Flow Cytometry / 168

19 Standardized Flow Cytometry Assays for Enumerating CD34+ Hematopoietic Stem Cells / 182

20 Functional Flow Cytometry-Based Assays of Myeloid and Lymphoid Functions for the Diagnostic Screening of Primary Immunodeficiency Diseases / 199

21 Acute Lymphoblastic Leukemia/Lymphoma: Diagnosis and Minimal Residual Disease Detection by Flow Cytometric Immunophenotyping / 207

22 Acute Myeloid Leukemia: Diagnosis and Minimal Residual Disease Detection by Flow Cytometry / 217

23 Chronic Lymphocytic Leukemia, the Prototypic Chronic Leukemia for Flow Cytometric Analysis / 226

24 Plasma Cell Disorders / 235

25 Future Cytometric Technologies and Applications / 251

section E

FUNCTIONAL CELLULAR ASSAYS / 259

26 Introduction / 261

27 Cryopreservation of Peripheral Blood Mononuclear Cells / 263

28 Lymphocyte Activation / 269

29 Functional Assays for B Cells and Antibodies / 280

30 Methods for Detection of Antigen-Specific T Cells by Enzyme-Linked Immunospot Assay (ELISPOT) / 290

31 Regulatory T Cell (Treg) Assays: Repertoire, Functions/and Clinical Importance of Human Treg / 296

32 Measurement of NK Cell Phenotype and Activity in Humans / 300

33 Functional Assays for the Diagnosis of Chronic Granulomatous Disease / 310

Section F

CYTOKINES AND CHEMOKINES / 321

34 Introduction / 323

35 Multiplex CytokineAssays / 324

36 Cytokine Measurement by Flow Cytometry / 338

37 Chemokine and Chemokine Receptor Analysis / 343

38 Cytokines: Diagnostic and Clinical Applications / 357

39 Detection of Anticytokine Autoantibodies and Clinical Applications / 365

section G

IMMUNOHISTOLOGY AND IMMUNOPATHOLOGY /  373

40 Introduction / 375

41 Immunofluorescence Methods in the Diagnosis of Renal and Cardiac Diseases / 376

42 Western Blot Analysis for the Detection of Anti-Glomerular Basement Membrane Antibodies and Anti-Phospholipase A2 Receptor Antibodies / 385

section H

INFECTIOUS DISEASES CAUSED BY BACTERIA, MYCOPLASMAS, CH LAMYDIAE, AND RICKETTSIAE /  391

43 Introduction / 393

44 Diagnostic Methods for Group A Streptococcal Infections / 394

45 Diagnosis of Helicobacter pylori Infection and Assessment of Eradication / 404

46 Laboratory Diagnosis of Syphilis / 412

47 Lyme Disease, Relapsing Fever, and Leptospirosis / 419

48 Immunological Tests in Tuberculosis / 433

49 Mycoplasma: Immunologic and Molecular Diagnostic Methods / 444

50 Chlamydia and Chlamydophila Infections / 453

51 The Rickettsiaceae, Anaplasmataceae, and Coxiellaceae / 461

52 The Bartonellaceae, Brucellaceae, and Francisellaceae / 473

section I

MYCOTIC AND PARASITIC DISEASES / 483

53 Introduction / 485

54 Immunological and Molecular Approaches for the Diagnosis of Parasitic Infections / 486

55 Serological and Molecular Diagnosis of Fungal Infections / 503

section J

VIRAL DISEASES /  535

56 Introduction / 537

57 Immunologic and Molecular Methods for Viral Diagnosis / 538

58 Herpes Simplex Virus / 550

59 Varicella-Zoster Virus / 556

60 Epstein-Barr Virus and Cytomegalovirus / 563

61 Human Herpesviruses 6, 7, and 8 / 578

62 Parvovirus B19 / 591

63 Respiratory Viruses / 598

64 Measles, Mumps, and Rubella Viruses / 610

65 Viral Hepatitis / 620

66 Viral Agents of Gastroenteritis / 639

67 Arboviruses / 648

68 Diagnosis of Hantavirus Infections / 658

69 Rabies Virus / 665

70 Human T-Cell Lymphotropic Virus Types 1 and 2 / 674

71 Diagnosis of Prion Diseases / 682

72 Principles and Procedures of Human Immunodeficiency Virus Diagnosis / 696

Section K

IMMUNODEFICIENCY DISEASES / 711

73 The Primary Immunodeficiency Diseases / 713

74 Severe Combined Immune Deficiency: Newborn Screening / 715

75 Combined Immunodeficiencies / 721

76 Antibody Deficiencies / 737

77 Hereditary and Acquired Complement Deficiencies / 749

78 Neutropenia and Neutrophil Defects / 765

79 Evaluation of Natural Killer (NK) Cell Defects / 774

section L

ALLERGIC DISEASES  /  781

80 Introduction / 783

81 Quantitation and Standardization of Allergens / 784

82 Immunological Methods in the Diagnostic Allergy Clinical and Research Laboratory / 795

83 Assay Methods for Measurement of Mediators and Markers of Allergic Inflammation / 801

84 Tests for Immunological Reactions to Foods / 815

85 Diagnosis of Rare Eosinophilic and Mast Cell Disorders / 825

Section M

SYSTEMIC AUTOIMMUNE DISEASES /  839

86 Introduction / 841

87 Antinuclear Antibody Tests / 843

88 Detection of Autoantibodies by Enzyme-Linked Immunosorbent Assay and Bead Assays / 859

89 Immunodiagnosis and Laboratory Assessment of Systemic Lupus Erythematosus / 868

90 Immunodiagnosis of Autoimmune Myopathies / 878

91 Immunodiagnosis of Scleroderma / 888

92 Antibody and Biomarker Testing in Rheumatoid Arthritis / 897

93 Antiphospholipid Antibody Syndrome: Clinical Manifestations and Laboratory Diagnosis / 905

94 Antineutrophil Cytoplasmic Antibodies (ANCA) and Strategies for Diagnosing ANCA-Associated Vasculitides / 909

95 IgG4-Related Disease: Diagnostic Testing by Serology, Flow Cytometry, and Immunohistopathology / 917

96 Future Perspectives for Rheumatoid Arthritis and Other Autoimmune Diseases / 922

section N

ORGAN-LOCALIZED AUTOIMMUNE DISEASES /  927

97  Introduction / 929

98  Endocrinopathies: Chronic Thyroiditis, Addison Disease, Pernicious Anemia, Graves' Disease, Diabetes, and Hypophysitis / 930

99  Myasthenia Gravis / 954

100 Autoantibodies to Glycolipids in Peripheral Neuropathy / 961

101 Detection of Antimitochondrial Autoantibodies in Primary Biliary Cholangitis and Liver Kidney Microsomal Antibodies in Autoimmune Hepatitis / 966

102 Cardiovascular Diseases / 975

103 Celiac Disease and Inflammatory Bowel Disease / 983

104 Autoantibodies Directed against Erythrocytes in Autoimmune Hemolytic Anemia / 990

105 Immune Thrombocytopenia / 995

106 Monitoring Autoimmune Reactivity within the Retina / 998

Section O

CANCER / 1005

107 Introduction / 1007

108 Immunoassay-Based Tumor Marker Measurement: Assays, Applications, and Algorithms / 1008

109 Malignancies of the Immune System: Use of Immunologic and Molecular Tumor Markers in Classification and Diagnostics / 1015

110 Monitoring of Immunologic Therapies / 1036

111 Circulating Tumor Cells as an Analytical Tool in the Management of Patients with Cancer / 1051

section P

TRANSPLANTATION IMMUNOLOGY /  1063

112 Histocompatibility and Immunogenetics Testing in the 21st Century / 1065

113 Molecular Methods for Human Leukocyte Antigen Typing: Current Practices and Future Directions / 1069

114 Evaluation of the Humoral Response in Transplantation / 1091

115 Non-Human Leukocyte Antigen Antibodies in Organ Transplantation / 1103

116 Evaluation of the Cellular Immune Response in Transplantation / 1108

117 Complement in Transplant Rejection / 1123

118 Molecular Characterization of Rejection in Solid Organ Transplantation / 1132

119 Killer Cell Immunoglobulln-Like Receptors in Clinical Transplantation / 1150

120 Chimerism Testing / 1161

Section Q

LABORATORY MANAGEMENT /  1169

121 Clinical Immunology Laboratory Accreditation, Licensure, and Credentials / 1171

122 Validation and Quality Control: General Principles and Application to the Clinical Immunology Laboratory / 1180

Author Index / 1193

Subject Index / 1195