Structural bioinformatics : methods and protocols / edited by Zoltán Gáspári. -- New York, NY : Humana Press, 2020. – (58.17/M592/v.2112)

Contents

Preface
Contributors
1  Visualization and Analysis of Protein Structures with LiteMol Suite
2  Comparative Protein Structure Analysis with Bio3D-Web
3  Using Dali for Protein Structure Comparison
4 Assessing Protein Function Through Structural Similarities with CATH
5  Protein Thermal Stability Engineering Using HoTMuSiC
6  Contact Area-Based Structural Analysis of Proteins and Their Complexes Using CAD-Score
7 A Comprehensive Computational Platform to Guide Drug Development Using Graph-Based Signature Methods
8  Systematic Exploration of Binding Modes of Ligands on Drug Targets
9  Using MemBlob to Analyze Transmembrane Regions Based on Cryo-EM Maps
10  Structural Characterization of Protein-Protein interactions with pyDockSAXS
11  Protein-Protein Modeling Using Cryo-EM Restraints
12  Modeling of Multimolecular Complexes
13  Biological Assembly Comparison with VAST+
14  BioMagResBank (BMRB) as a Resource for Structural Biology
15  Integrating Molecular Simulation and Experimental Data: A Bayesian/Maximum Entropy Reweighting Approach
16  Evaluation and Selection of Dynamic Protein Structural Ensembles with CoNSEnsX
Index