Differential display methods and protocols /edited by Peng Liang, Jonathan D. Meade, Arthur B. Pardee --Humana Press, 2006. --(58.17/M592/v.317)

Contents

Contents:

1. Global Analysis of Gene Expression by Differential Display: a Mathematical

     Model  3

2. Automation of Fluorescent Differential Display With Digital Readout  23

3. Ordered Differential Display  59

4. GeneCalling: Transcript Profiling Coupled to a Gene Database Query  75

5. High-Density Sampling Differential Display of Prokaryotic mRNAs

    With RAP -PCR  85

6. Vertical Arrays: Microarrays of Complex Mixtures of Nucleic Acids  99

7. Automated Pattern Ranking in Differential Display Data Analysis  111

8. Linking cDNA-AFLP-Based Gene Expression Patterns and ESTs  123

9. Differentially Expressed Genes Associated With Hepatitis B Virus HBx

    and MHBs Protein Function in Hepatocellular Carcinoma  141

10. Identification of Disease Markers by Differential Display:

       Prion Disease  157

11.Saturation Screening for p53 Target Genes by Digital Fluorescent

      Differential Display  179

12. Identification of p53-Regulated Genes by the Method of

      Differential Display  193

13.Comprehensive Analysis of Ovarian Gene Expression During Ovulation

      Using Differential Display  219

14. Comprehensive Analysis of Ovarian Gene Expression During Ovulation

       Using Differential Display  219

15. Functional Analysis of Nocturnin: A Circadian Clock-Regulated Gene

       Identified by Differential Display  243

16. Isolation and Characterization of Anthocyanin 5-O-Glucosyltransferase in 

       Perilla frutescens var. crispa by Differential Display  255

17. Identification of Target Genes of a Yeast Transcriptional Repressor  267

18. Detection of an mRNA Polymorphism by Differential Display  279

19. Silencing in Yeast: Identification of Clr4 Targets  287

20. Identification of mRNA Bound to RNA Binding proteins by

       Differential Display  299