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Evolutionary bioinformatics / by Donald R. Forsdyke. — 2nd ed. — New York : Springer, c2011. – (58.17115/F732/2nd ed.)

Contents

    Contents
    
    Note on Second Edition
    Abbreviations
    Prologue - To Select is Not to Preserve
    Part 1 Information and DNA
    1. Memory - A Phenomenon of Arrangement 3
    2. Chargaff's First Parity Rule 27
    3. Information Levels and Barriers 47
    Part 2 Parity and Non-Parity
    4. Chargaff's Second Parity Rule 69
    5. Stems and Loops 91
    6. Chargaff's Cluster Rule 111
    Part 3 Variation and Speciation
    7. Mutation 131
    8. Species Survival and Arrival 153
    9. The Weak Point 171
    10. Chargaff's GC Rule 189
    11. Homostability 205
    Part 4 Conflict within Genomes
    12. Conflict Resolution 221
    13. Exons and Introns 249
    14. Complexity 267
    Part 5 Conflict, between Genomes
    15. Self/Not-Self? 295
    16. The Crowded Cytosol 319
    Part 6 Sex and Error-Correction
    17. Rebooting the Genome 341
    18. The Fifth Letter 363
    Part 7 Information and Mind
    19. Memory - Where to Arrange and Where? 377
    Epilogue To Preserve is Not To Select 391
    Appendix 1 What the Graph Says 405
    Appendix 2 Scoring Information Potential 411
    Appendix 3 No Line? 415
    Acknowledgments 425
    References and Notes 429
    Index 473