Computational biology : new research / Alona S. Russe, editor. — Hauppauge, N.Y. : Nova Science, c2009. – (58.17115/C738)

Contents

    Contents
    
    Preface
    Expert Commentary Expressed Sequence Tags in Cancer Genomics
    Short Commentaries
    Short Commentary A Protein Bioinformatics for Drug Discovery Concavity Druggability and Antibody Druggability
    Short Commentary B A Linkage Disequilibrium-Based Statistical Approach to Discovering Interactions Among SNP Alleles at Multiple Loci Contributing to Human Skin Pigmentation Variation
    Short Commentary C Sufficient Conditions for Exact Penalty in Constrained Optimization on Complete Metric Spaces
    Short Commentary D How to Create a Computational Medicine Study
    Short Commentary E Identifying Related Cancer Types
    Research and Review Studies
    Chapter 1 Sample Size Calculation and Power in Genomics Studies
    Chapter 2 Coupling Computational and Experimental Analysis for the Prediction of Transcription Factor E2F Regulatory Elements in the Human Gene Promoter
    Chapter 3 Solving a Stochastic Generalized Assignment Problem with Branch and Price
    Chapter 4 Reconstruction and Analysis of Large-Scale Phylogenetic Data， Challenges and Opportunities
    Chapter 5 Chromatin Fiber: 30 Years of Models
    Chapter 6 Fast Modelling of Protein Structures Through Multi-level Contact Maps
    Chapter 7 Coarse-Grained Structural Model of Protein Molecules
    Chapter 8 Differentiating Superficial and Advanced Urothelial Bladder Carcinomas Based on Gene Expression Profiles Analyzed Using Self-Organizing Maps
    Chapter 9 Full Sibling Reconstruction in Wild Populations From Microsatellite Genetic Markers
    Chapter 10 Recent Issues and Computational Approaches for Developing Prognostic Gene Signatures from Gene Expression Data
    Chapter 11 Comparison of Φ-Values and Folding Time Predictions by Using Monte-Carlo and Dynamic Programming Approaches
    Chapter 12 Computational Methods for Protein Structural Class Prediction
    Chapter 13 Fundamentals of Natural Computation in Living Systems
    Chapter 14 Extraction of Position-Sensitive Promoter Constituents
    Chapter 15 Deconvolution of Positional Scanning Synthetic Combinatorial Libraries: Chapter 16 Mathematical Models and Bioinformatics Approaches Scripting of Molecular Structure Viewer for Data Analysis Using Lua Language Interpreter
    Chapter 17 Computational Medicine Research in Hematology: A Study on Hemoglobin and Prothrombin Disorders
    Index