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Micro and nano technologies in bioanalysis : methods and protocols / edited by James Weifu Lee and Robert S. Foote. — Dordrecht ; London : Humana Press, c2009. – (58.17/M592/v.544)

Contents

    Contents
    
    Preface
    Acknowledgments
    Contributors
    Part I Applications of Microfluidics and Nanopores in Separation, Detection, Manipulation, and Analysis of Biomolecules
    1 HPLC-Chip/MS Technology in Proteomic Profiling
    2 Nanofluidic Channel Fabrication and Manipulation of DNA Molecules
    3 A Single-Molecule Barcoding System using Nanoslits for DNA Analysis: Nanocoding 29
    4 Microfluidic Devices with Photodefinable Pseudo-valves for Protein Separation
    5 Microfluidic Chips Designed for Measuring Biomolecules Through a Microbead-Based Quantum Dot Fluorescence Assay
    6 DNA Focusing Using Microfabricated Electrode Arrays
    7 Solid-State Nanopore for Detecting Individual Biopolymers
    8 Inserting and Manipulating DNA in a Nanopore with Optical Tweezers
    9 Forming an α-Hemolysin Nanopore for Single-Molecule Analysis 113
    10 Nanopore Force Spectroscopy on DNA Duplexes
    Part II Technologies of Physical Science and Chemistry in Detection and Analysis of Biomolecules
    11 Quantitative Chemical Analysis of Single Cells
    12 Trapping and Detection of Single Molecules in Water..
    13 ZnO Nanorods as an Intracellular Sensor for pH Measurements
    14 Analysis of Biomolecules Using Surface Plasmons
    15 Use of Residual Dipolar Couplings in Structural Analysis of Protein-Ligand Complexes by Solution NMR Spectroscopy
    16 Raman-Assisted X-Ray Crystallography for the Analysis of Biomolecules 253
    17 Methods and Software for Diffuse X-Ray Scattering from Protein Crystals 269
    18 Deuterium Labeling for Neutron Structure-Function-Dynamics Aaaalysis 281
    19 Small-Angle Neutron Scattering for Molecular Biology: Basics and Instrumentation 293
    20 Small-Angle Scattering and Neutron Contrast Variation for Studying Bio-Molecular Complexes 307
    21 Protein Sequencing with Tandem Mass Spectrometry
    22 Metabolic Analysis
    Part III Applications of Quantum Dots and Molecular Fluorescence in Detection, Tracking and Imaging of Biomolecules
    23 Multicolor Detection of Combed DNA Molecules Using Quantum Dots 357
    24 Quantum Dot Molecular Beacons for DNA Detection 367
    25 Quantum Dot Hybrid Gel Blotting: A Technique for Identifying Quantum Dot-Protein/Protein-Protein Interactions 381
    26 In Vivo Imaging of Quantum Dots
    27 Semiconductor Fluorescent Quantum Dots: Efficient Biolabels in Cancer Diagnostics
    28 The Monitoring and Affinity Purification of Proteins Using Dual Tags with Tetracysteine Motifs 421
    29 Use of Genomic DNA as Reference in DNA Microarrays
    30 Single-Molecule Imaging of Fluorescent Proteins Expressed in Living Cells
    31 MicroPET, MicroSPECT, and NIR Fluorescence Imaging of Biomolecules In Vivo
    32 Ultrahigh Resolution Imaging of Biomolecules by Fluorescence Photoactivation Localization Microscopy 483
    Part IV Nanotechnologies for Biomolecular Delivery, Gene Therapy and Expression Control
    33 Real-Time Imaging of Gene Delivery and Expression with DNA Nanoparticle Technologies 525
    34 Nanoparticle-Mediated Gene Delivery
    35 Magnetic Nanoparticles for Local Drug Delivery Using Magnetic Implants 559
    36 Functionalized Magnetic Nanoparticles as an In Vivo Delivery System 571
    37 Formulation/Preparation of Functionalized Nanoparticles for In Vivo Targeted Drug Delivery 589
    38 Detection of mRNA in Single Living Cells Using AFM Nanoprobes
    39 Reverse Transfection Using Gold Nanoparticles
    40 Custom-Designed Molecular Scissors for Site-Specific Manipulation of the Plant and Mammalian Genomes 617
    41 Determining DNA Sequence Specificity of Natural and Artificial Transcription Factors by Cognate Site Identifier Analysis 637
    Index 655